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Computational Methods in Systems Biology<br />
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Type.................: Ebook<br />
Part Size............: 11,918,109 bytes<br />
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Posted by............: ~tqw~<br />
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Release Notes<br />
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This book constitutes the refereed proceedings of the International Conference <br />
on Computational Methods in Systems Biology, CMSB 2007, held in Edinburgh, <br />
Scotland, September 2007.<br />
<br />
The 16 revised full papers presented were carefully reviewed and selected. The <br />
papers present a variety of techniques from computer science, such as language <br />
design, concurrency theory, software engineering, and formal methods, for <br />
biologists, physicists, and mathematicians interested in the systems-level <br />
understanding of cellular processes.<br />
<br />
Table Of Contents<br />
<br />
Chemical Master Equation and Langevin Regimes for a Gene Transcription Model 1<br />
<br />
Simultaneous Stochastic Simulation of Multiple Perturbations in Biological <br />
Network Models 15<br />
<br />
Modelling Yeast Pre-rRNA Processing 32<br />
<br />
On the Analysis of Numerical Data Time Series in Temporal Logic 48<br />
<br />
Context Sensitivity in Logical Modeling with Time Delays 64<br />
<br />
Stochastic Simulation of Biological Systems with Dynamical Compartment <br />
Structure 80<br />
<br />
Computational Simulation of Optical Tracking of Cell Populations Using Quantum <br />
Dot Fluorophores 96<br />
<br />
A Formal and Integrated Framework to Simulate Evolution of Biological <br />
Pathways 106<br />
<br />
Reconstruction of Mammalian Cell Cycle Regulatory Network from Microarray Data <br />
Using Stochastic Logical Networks 121<br />
<br />
Reconstruction of Mammalian Cell Cycle Regulatory Network from<br />
Microarray Data Using Stochastic Logical Networks 121<br />
<br />
An Automated Translation from a Narrative Language for Biological<br />
Modelling into Process Algebra 136<br />
<br />
Expressive Models for Synaptic Plasticity 152<br />
<br />
Modelization and Simulation of Nano Devices in nanoê Calculus 168<br />
<br />
Efficient, Correct Simulation of Biological Processes in the Stochastic<br />
Pi-calculus 184<br />
<br />
A Unifying Framework for Modelling and Analysing Biochemical Pathways Using <br />
Petri Nets 200<br />
<br />
Reconstructing Metabolic Pathways by Bidirectional Chemical Search 217<br />
<br />
Decision Diagrams for the Representation and Analysis of Logical<br />
Models of Genetic Networks 233<br />
<br />
Author Index 249<br />
<br />
Product Details<br />
<br />
* ISBN: 3540751394<br />
* ISBN-13: 9783540751397<br />
* Format: Other Format<br />
* Publisher: Springer-Verlag New York, LLC<br />
* Pub. Date: November 2007<br />
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